3QR8 image
Entry Detail
PDB ID:
3QR8
Keywords:
Title:
Crystal structure of the bacteriophage P2 membrane-piercing protein gpV
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2011-02-17
Release Date:
2012-02-22
Method Details:
Experimental Method:
Resolution:
2.03 Å
R-Value Free:
0.30
R-Value Work:
0.25
R-Value Observed:
0.26
Space Group:
P 3 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Baseplate assembly protein V
Chain IDs:A
Chain Length:211
Number of Molecules:1
Biological Source:Enterobacteria phage P2
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MSE A MET SELENOMETHIONINE
Primary Citation
Phage pierces the host cell membrane with the iron-loaded spike.
Structure 20 326 339 (2012)
PMID: 22325780 DOI: 10.1016/j.str.2011.12.009

Abstact

Bacteriophages with contractile tails and the bacterial type VI secretion system have been proposed to use a special protein to create an opening in the host cell membrane during infection. These proteins have a modular architecture but invariably contain an oligonucleotide/oligosaccharide-binding (OB-fold) domain and a long β-helical C-terminal domain, which initiates the contact with the host cell membrane. Using X-ray crystallography and electron microscopy, we report the atomic structure of the membrane-piercing proteins from bacteriophages P2 and ϕ92 and identify the residues that constitute the membrane-attacking apex. Both proteins form compact spikes with a ∼10Å diameter tip that is stabilized by a centrally positioned iron ion bound by six histidine residues. The accumulated data strongly suggest that, in the process of membrane penetration, the spikes are translocated through the lipid bilayer without undergoing major unfolding.

Legend

Protein

Chemical

Disease

Primary Citation of related structures