3QPK image
Deposition Date 2011-02-14
Release Date 2011-05-11
Last Version Date 2024-11-06
Entry Detail
PDB ID:
3QPK
Keywords:
Title:
Probing oxygen channels in Melanocarpus albomyces laccase
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.26
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
C 1 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Laccase-1
Gene (Uniprot):LAC1
Chain IDs:A, B
Chain Length:559
Number of Molecules:2
Biological Source:Melanocarpus albomyces
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN A ASN GLYCOSYLATION SITE
Primary Citation
Probing the Dioxygen Route in Melanocarpus albomyces Laccase with Pressurized Xenon Gas.
Biochemistry 50 4396 4398 (2011)
PMID: 21524088 DOI: 10.1021/bi200486b

Abstact

Laccases catalyze the oxidation of phenolic substrates and the concominant reduction of dioxygen to water. We used xenon as an oxygen probe in search of routes for the entry of dioxygen into the catalytic center. Two xenon-pressurized crystal structures of recombinant Melanocarpus albomyces laccase were determined, showing three hydrophobic Xe-binding sites located in domain C. The analysis of hydrophobic cavities in other laccase structures further suggested the preference of domain C for binding of hydrophobic species such as dioxygen, thus suggesting that the hydrophobic core of domain C could function as a channel through which dioxygen can enter the trinuclear copper center.

Legend

Protein

Chemical

Disease

Primary Citation of related structures
Feedback Form
Name
Email
Institute
Feedback