3QL3 image
Deposition Date 2011-02-02
Release Date 2011-04-27
Last Version Date 2024-02-21
Entry Detail
PDB ID:
3QL3
Keywords:
Title:
Re-refined coordinates for PDB entry 1RX2
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.80 Å
R-Value Free:
0.21
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Dihydrofolate reductase
Gene (Uniprot):folA
Chain IDs:A
Chain Length:159
Number of Molecules:1
Biological Source:Escherichia coli
Primary Citation
A dynamic knockout reveals that conformational fluctuations influence the chemical step of enzyme catalysis.
Science 332 234 238 (2011)
PMID: 21474759 DOI: 10.1126/science.1198542

Abstact

Conformational dynamics play a key role in enzyme catalysis. Although protein motions have clear implications for ligand flux, a role for dynamics in the chemical step of enzyme catalysis has not been clearly established. We generated a mutant of Escherichia coli dihydrofolate reductase that abrogates millisecond-time-scale fluctuations in the enzyme active site without perturbing its structural and electrostatic preorganization. This dynamic knockout severely impairs hydride transfer. Thus, we have found a link between conformational fluctuations on the millisecond time scale and the chemical step of an enzymatic reaction, with broad implications for our understanding of enzyme mechanisms and for design of novel protein catalysts.

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