3Q4W image
Entry Detail
PDB ID:
3Q4W
Keywords:
Title:
The structure of archaeal inorganic pyrophosphatase in complex with substrate
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2010-12-24
Release Date:
2012-01-04
Method Details:
Experimental Method:
Resolution:
1.44 Å
R-Value Free:
0.13
R-Value Work:
0.10
R-Value Observed:
0.11
Space Group:
H 3 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Tt-IPPase
Chain IDs:A
Chain Length:178
Number of Molecules:1
Biological Source:Thermococcus thioreducens
Primary Citation
Inorganic pyrophosphatase crystals from Thermococcus thioreducens for X-ray and neutron diffraction.
Acta Crystallogr.,Sect.F 68 1482 1487 (2012)
PMID: 23192028 DOI: 10.1107/S1744309112032447

Abstact

Inorganic pyrophosphatase (IPPase) from the archaeon Thermococcus thioreducens was cloned, overexpressed in Escherichia coli, purified and crystallized in restricted geometry, resulting in large crystal volumes exceeding 5 mm3. IPPase is thermally stable and is able to resist denaturation at temperatures above 348 K. Owing to the high temperature tolerance of the enzyme, the protein was amenable to room-temperature manipulation at the level of protein preparation, crystallization and X-ray and neutron diffraction analyses. A complete synchrotron X-ray diffraction data set to 1.85 Å resolution was collected at room temperature from a single crystal of IPPase (monoclinic space group C2, unit-cell parameters a=106.11, b=95.46, c=113.68 Å, α=γ=90.0, β=98.12°). As large-volume crystals of IPPase can be obtained, preliminary neutron diffraction tests were undertaken. Consequently, Laue diffraction images were obtained, with reflections observed to 2.1 Å resolution with I/σ(I) greater than 2.5. The preliminary crystallographic results reported here set in place future structure-function and mechanism studies of IPPase.

Legend

Protein

Chemical

Disease

Primary Citation of related structures