3P76 image
Deposition Date 2010-10-12
Release Date 2011-02-09
Last Version Date 2023-09-06
Entry Detail
PDB ID:
3P76
Keywords:
Title:
X-ray crystal structure of Aquifex aeolicus LpxC complexed SCH1379777
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
1.93 Å
R-Value Free:
0.18
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 61
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase
Gene (Uniprot):lpxC
Chain IDs:A
Chain Length:271
Number of Molecules:1
Biological Source:Aquifex aeolicus
Primary Citation
Design and synthesis of potent Gram-negative specific LpxC inhibitors.
Bioorg.Med.Chem.Lett. 21 1155 1161 (2011)
PMID: 21273067 DOI: 10.1016/j.bmcl.2010.12.111

Abstact

Antibiotic resistant hospital acquired infections are on the rise, creating an urgent need for novel bactericidal drugs. Enzymes involved in lipopolysaccharide (LPS) biosynthesis are attractive antibacterial targets since LPS is the major structural component of the outer membrane of Gram-negative bacteria. Lipid A is an essential hydrophobic anchor of LPS and the first committed step in lipid A biosynthesis is catalyzed by a unique zinc dependent metalloamidase, UDP-3-O-(R-3-hydroxymyristoyl)-N-acetylglucosamine deacetylase (LpxC). LpxC is an attractive Gram-negative only target that has been chemically validated by potent bactericidal hydroxamate inhibitors that work by coordination of the enzyme's catalytic zinc ion. An exploratory chemistry effort focused on expanding the SAR around hydroxamic acid zinc-binding 'warheads' lead to the identification of novel compounds with enzyme potency and antibacterial activity similar to CHIR-090.

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Protein

Chemical

Disease

Primary Citation of related structures