3P4F image
Deposition Date 2010-10-06
Release Date 2010-12-08
Last Version Date 2023-09-06
Entry Detail
PDB ID:
3P4F
Keywords:
Title:
Structural and biochemical insights into MLL1 core complex assembly and regulation.
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.35 Å
R-Value Free:
0.24
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:WD repeat-containing protein 5
Gene (Uniprot):WDR5
Chain IDs:A
Chain Length:317
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Retinoblastoma-binding protein 5
Gene (Uniprot):RBBP5
Mutations:Y381D
Chain IDs:B
Chain Length:11
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Histone-lysine N-methyltransferase MLL
Gene (Uniprot):KMT2A
Mutations:S3763A
Chain IDs:C
Chain Length:10
Number of Molecules:1
Biological Source:Homo sapiens
Primary Citation
Structural and biochemical insights into MLL1 core complex assembly.
Structure 19 101 108 (2011)
PMID: 21220120 DOI: 10.1016/j.str.2010.09.022

Abstact

Histone H3 Lys-4 methylation is predominantly catalyzed by a family of methyltransferases whose enzymatic activity depends on their interaction with a three-subunit complex composed of WDR5, RbBP5, and Ash2L. Here, we report that a segment of 50 residues of RbBP5 bridges the Ash2L C-terminal domain to WDR5. The crystal structure of WDR5 in ternary complex with RbBP5 and MLL1 reveals that both proteins binds peptide-binding clefts located on opposite sides of WDR5's β-propeller domain. RbBP5 engages in several hydrogen bonds and van der Waals contacts within a V-shaped cleft formed by the junction of two blades on WDR5. Mutational analyses of both the WDR5 V-shaped cleft and RbBP5 residues reveal that the interactions between RbBP5 and WDR5 are important for the stimulation of MLL1 methyltransferase activity. Overall, this study provides the structural basis underlying the formation of the WDR5-RbBP5 subcomplex and further highlight the crucial role of WDR5 in scaffolding the MLL1 core complex.

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Primary Citation of related structures