3OEI image
Deposition Date 2010-08-12
Release Date 2011-03-16
Last Version Date 2023-09-20
Entry Detail
PDB ID:
3OEI
Title:
Crystal structure of Mycobacterium tuberculosis RelJK (Rv3357-Rv3358-RelBE3)
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.15 Å
R-Value Free:
0.25
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:RelJ (Antitoxin Rv3357)
Chain IDs:A, B, I, J, M, N
Chain Length:98
Number of Molecules:6
Biological Source:Mycobacterium tuberculosis
Polymer Type:polypeptide(L)
Molecule:RelK (Toxin Rv3358)
Chain IDs:C, D, G, H, K, L, O, P
Chain Length:96
Number of Molecules:8
Biological Source:Mycobacterium tuberculosis
Polymer Type:polypeptide(L)
Molecule:RelJ (Antitoxin Rv3357)
Chain IDs:E, F
Chain Length:98
Number of Molecules:2
Biological Source:Mycobacterium tuberculosis
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MLZ E LYS N-METHYL-LYSINE
Ligand Molecules
Primary Citation
Comparative proteomics identifies the cell-associated lethality of M. tuberculosis RelBE-like toxin-antitoxin complexes.
Structure 21 627 637 (2013)
PMID: 23523424 DOI: 10.1016/j.str.2013.02.008

Abstact

The Mycobacterium tuberculosis (Mtb) genome encodes approximately 90 toxin-antitoxin protein complexes, including three RelBE family members, which are believed to play a major role in bacterial fitness and pathogenicity. We have determined the crystal structures of Mtb RelBE-2 and RelBE-3, and the structures reveal homologous heterotetramers. Our structures suggest RelE-2, and by extension the closely related RelE-1, use a different catalytic mechanism than RelE-3, because our analysis of the RelE-2 structure predicts additional amino acid residues that are likely to be functionally significant and are missing from analogous positions in the RelE-3 structure. Toxicity assays corroborate our structural findings; overexpression of RelE-3, whose active site is more similar to Escherichia coli YoeB, has limited consequences on bacterial growth, whereas RelE-1 and RelE-2 overexpression results in acute toxicity. Moreover, RelE-2 overexpression results in an elongated cell phenotype in Mycobacterium smegmatis and protects M. tuberculosis against antibiotics, suggesting a different functional role for RelE-2.

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Disease

Primary Citation of related structures