3OBL image
Deposition Date 2010-08-06
Release Date 2010-10-20
Last Version Date 2024-02-21
Entry Detail
PDB ID:
3OBL
Title:
Crystal structure of the potent anti-HIV cyanobacterial lectin from Oscillatoria Agardhii
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.20 Å
R-Value Free:
0.16
R-Value Work:
0.14
Space Group:
P 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Lectin
Gene (Uniprot):OAA
Chain IDs:A, B
Chain Length:132
Number of Molecules:2
Biological Source:Planktothrix agardhii
Ligand Molecules
Primary Citation
Novel fold and carbohydrate specificity of the potent anti-HIV cyanobacterial lectin from Oscillatoria agardhii.
J.Biol.Chem. 286 1588 1597 (2011)
PMID: 20961847 DOI: 10.1074/jbc.M110.173278

Abstact

Oscillatoria agardhii agglutinin (OAA) is a recently discovered cyanobacterial lectin that exhibits potent anti-HIV activity. Up to now, only its primary structure and carbohydrate binding data have been available. To elucidate the structural basis for the antiviral mechanism of OAA, we determined the structure of this lectin by x-ray crystallography at 1.2 Å resolution and mapped the specific carbohydrate recognition sites of OAA by NMR spectroscopy. The overall architecture of OAA comprises 10 β-strands that fold into a single, compact, β-barrel-like domain, creating a unique topology compared with all known protein structures in the Protein Data Bank. OAA sugar binding was tested against Man-9 and various disaccharide components of Man-9. Two symmetric carbohydrate-binding sites were located on the protein, and a preference for Manα(1-6)Man-linked sugars was found. Altogether, our structural results explain the antiviral activity OAA and add to the growing body of knowledge about antiviral lectins.

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Primary Citation of related structures