3O5W image
Deposition Date 2010-07-28
Release Date 2011-09-14
Last Version Date 2024-10-30
Entry Detail
PDB ID:
3O5W
Keywords:
Title:
Binding of kinetin in the active site of mistletoe lectin I
Biological Source:
Source Organism:
Viscum album (Taxon ID: 3972)
Method Details:
Experimental Method:
Resolution:
2.70 Å
R-Value Free:
0.22
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 65 2 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Beta-galactoside-specific lectin 1 chain A isoform 1
Chain IDs:A
Chain Length:254
Number of Molecules:1
Biological Source:Viscum album
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Beta-galactoside-specific lectin 1 chain B
Chain IDs:B
Chain Length:263
Number of Molecules:1
Biological Source:Viscum album
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN B ASN GLYCOSYLATION SITE
Peptide-like Molecules
PRD_900017
Primary Citation
Binding of the plant hormone kinetin in the active site of Mistletoe Lectin I from Viscum album.
Biochim.Biophys.Acta 1824 334 338 (2012)
PMID: 22064121 DOI: 10.1016/j.bbapap.2011.10.013

Abstact

The crystal structure of the ribosome inhibiting protein Mistletoe Lectin I (ML-I) derived from the European mistletoe, Viscum album, in complex with kinetin has been refined at 2.7Å resolution. Suitably large crystals of ML-I were obtained applying the counter diffusion method using the Gel Tube R Crystallization Kit (GT-R) on board the Russian Service Module on the international space station ISS within the GCF mission No. 6, arranged by the Japanese aerospace exploration agency (JAXA). Hexagonal bi-pyramidal crystals were grown during three months under microgravity. Before data collection the crystals were soaked in a saturated solution of kinetin and diffraction data to 2.7Å were collected using synchrotron radiation and cryogenic techniques. The atomic model was refined and revealed a single kinetin molecule in the ribosome inactivation site of ML-I. The complex demonstrates the feasibility of mistletoe to bind plant hormones out of the host regulation system as part of a self protection mechanism.

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Primary Citation of related structures