ISDA

Deposition Date 2010-07-17

Release Date 2011-02-16

Last Version Date 2023-12-06

Entry Detail

PDB ID:

3NZX

Keywords:

hydrolase/hydrolase inhibitor

Title:

Crystal structure of the yeast 20S proteasome in complex with ligand 2c

Biological Source:

Source Organism:

Saccharomyces cerevisiae (Taxon ID: 4932)

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.70 Å

R-Value Free:

0.24

R-Value Work:

0.22

R-Value Observed:

0.22

Space Group:

P 1 21 1

Download Validation Report

Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Proteasome component Y7
Gene (Uniprot):PRE8
Chain IDs:A, O
Chain Length:250
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae

UniProt ID:P23639 Pfam ID:PF10584, PF00227

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Proteasome component Y13
Gene (Uniprot):PRE9
Chain IDs:B, P
Chain Length:258
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae

UniProt ID:P23638 Pfam ID:PF10584, PF00227

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Proteasome component PRE6
Gene (Uniprot):PRE6
Chain IDs:C, Q
Chain Length:254
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae

UniProt ID:P40303 Pfam ID:PF10584, PF00227

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Proteasome component PUP2
Gene (Uniprot):PUP2
Chain IDs:D, R
Chain Length:260
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae

UniProt ID:P32379 Pfam ID:PF10584, PF00227

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Proteasome component PRE5
Gene (Uniprot):PRE5
Chain IDs:E, S
Chain Length:234
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae

UniProt ID:P40302 Pfam ID:PF10584, PF00227

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Proteasome component C1
Gene (Uniprot):PRE10
Chain IDs:F, T
Chain Length:288
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae

UniProt ID:P21242 Pfam ID:PF10584, PF00227

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Proteasome component C7-alpha
Gene (Uniprot):SCL1
Chain IDs:G, U
Chain Length:252
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae

UniProt ID:P21243 Pfam ID:PF10584, PF00227 EC:3.4.25.1

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Proteasome component PUP1
Gene (Uniprot):PUP1
Chain IDs:H, V
Chain Length:261
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae

UniProt ID:P25043 Pfam ID:PF00227, PF12465

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Proteasome component PUP3
Gene (Uniprot):PUP3
Chain IDs:I, W
Chain Length:205
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae

UniProt ID:P25451 Pfam ID:PF00227

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Proteasome component C11
Gene (Uniprot):PRE1
Chain IDs:J, X
Chain Length:198
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae

UniProt ID:P22141 Pfam ID:PF00227

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Proteasome component PRE2
Gene (Uniprot):PRE2
Chain IDs:K, Y
Chain Length:287
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae

UniProt ID:P30656 Pfam ID:PF00227

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Proteasome component C5
Gene (Uniprot):PRE7
Chain IDs:L, Z
Chain Length:241
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae

UniProt ID:P23724 Pfam ID:PF00227

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Proteasome component PRE4
Gene (Uniprot):PRE4
Chain IDs:M, AA (auth: 1)
Chain Length:266
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae

UniProt ID:P30657 Pfam ID:PF00227

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Proteasome component PRE3
Gene (Uniprot):PRE3
Chain IDs:N, BA (auth: 2)
Chain Length:215
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae

UniProt ID:P38624 Pfam ID:PF00227 EC:3.4.25.1

Modified Residue