3NV9 image
Deposition Date 2010-07-08
Release Date 2011-07-20
Last Version Date 2025-06-25
Entry Detail
PDB ID:
3NV9
Keywords:
Title:
Crystal structure of Entamoeba histolytica Malic Enzyme
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.25 Å
R-Value Free:
0.24
R-Value Work:
0.17
R-Value Observed:
0.18
Space Group:
P 43 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Malic enzyme
Gene (Uniprot):CL6EHI_044970
Chain IDs:A, B
Chain Length:487
Number of Molecules:2
Biological Source:Entamoeba histolytica
Primary Citation
Metronidazole Activation by a Deeply Entangled Dimeric Malic Enzyme in Entamoeba histolytica.
Pathogens 14 ? ? (2025)
PMID: 40137762 DOI: 10.3390/pathogens14030277

Abstact

Metronidazole is the preferred drug for treating amoebiasis caused by Entamoeba histolytica. Its antiamoebic activity is primarily attributed to activation by various reductases. This study reports an alternative activation pathway in E. histolytica mediated by the decarboxylating malic enzyme. Functional characterization of this NADPH-dependent enzyme reveals that it is secreted into the extracellular milieu and may play a role in E. histolytica adhesion to human enteric cells. Structural analysis of the E. histolytica malic enzyme (EhME) demonstrates that the protein forms a strict dimer, with the protomers interlocked by a unique knot structure formed by two polypeptide chains. This distinctive structural feature closely aligns EhME with its prokaryotic counterparts. In conclusion, our findings reveal that E. histolytica harbors a deeply entangled dimeric malic enzyme that contributes to metronidazole susceptibility, sharing structural similarities with bacterial malic enzymes.

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Primary Citation of related structures
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