3NTU image
Entry Detail
PDB ID:
3NTU
Keywords:
Title:
RADA RECOMBINASE D302K MUTANT IN COMPLEX with AMP-PNP
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2010-07-05
Release Date:
2011-07-27
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 61
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:DNA repair and recombination protein radA
Mutations:N4G, D302K
Chain IDs:A
Chain Length:319
Number of Molecules:1
Biological Source:Methanococcus voltae
Primary Citation
RAD51 protein ATP cap regulates nucleoprotein filament stability.
J.Biol.Chem. 287 8724 8736 (2012)
PMID: 22275364 DOI: 10.1074/jbc.M111.239426

Abstact

RAD51 mediates homologous recombination by forming an active DNA nucleoprotein filament (NPF). A conserved aspartate that forms a salt bridge with the ATP γ-phosphate is found at the nucleotide-binding interface between RAD51 subunits of the NPF known as the ATP cap. The salt bridge accounts for the nonphysiological cation(s) required to fully activate the RAD51 NPF. In contrast, RecA homologs and most RAD51 paralogs contain a conserved lysine at the analogous structural position. We demonstrate that substitution of human RAD51(Asp-316) with lysine (HsRAD51(D316K)) decreases NPF turnover and facilitates considerably improved recombinase functions. Structural analysis shows that archaebacterial Methanococcus voltae RadA(D302K) (MvRAD51(D302K)) and HsRAD51(D316K) form extended active NPFs without salt. These studies suggest that the HsRAD51(Asp-316) salt bridge may function as a conformational sensor that enhances turnover at the expense of recombinase activity.

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