3NTG image
Deposition Date 2010-07-04
Release Date 2010-10-27
Last Version Date 2024-11-20
Entry Detail
PDB ID:
3NTG
Keywords:
Title:
Crystal structure of COX-2 with selective compound 23d-(R)
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.19 Å
R-Value Free:
0.25
R-Value Work:
0.20
R-Value Observed:
0.21
Space Group:
P 21 21 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Prostaglandin G/H synthase 2
Gene (Uniprot):Ptgs2
Chain IDs:A, B, C, D
Chain Length:552
Number of Molecules:4
Biological Source:Mus musculus
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN B ASN GLYCOSYLATION SITE
Primary Citation
The novel benzopyran class of selective cyclooxygenase-2 inhibitors. Part 2: The second clinical candidate having a shorter and favorable human half-life.
Bioorg.Med.Chem.Lett. 20 7159 7163 (2010)
PMID: 20709553 DOI: 10.1016/j.bmcl.2010.07.054

Abstact

In this Letter, we provide the structure-activity relationships, optimization of design, testing criteria, and human half-life data for a series of selective COX-2 inhibitors. During the course of our structure-based drug design efforts, we discovered two distinct binding modes within the COX-2 active site for differently substituted members of this class. The challenge of a undesirably long human half-life for the first clinical candidate 1t(1/2)=360 h was addressed by multiple strategies, leading to the discovery of 29b-(S) (SC-75416) with t(1/2)=34 h.

Legend

Protein

Chemical

Disease

Primary Citation of related structures