3NJ1 image
Deposition Date 2010-06-16
Release Date 2010-08-18
Last Version Date 2023-09-06
Entry Detail
PDB ID:
3NJ1
Title:
X-ray crystal structure of the PYL2(V114I)-pyrabactin A complex
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.95 Å
R-Value Free:
0.21
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 61 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Abscisic acid receptor PYL2
Gene (Uniprot):PYL2
Mutations:V114I
Chain IDs:A
Chain Length:193
Number of Molecules:1
Biological Source:Arabidopsis thaliana
Primary Citation
Structural basis for selective activation of ABA receptors.
Nat.Struct.Mol.Biol. 17 1109 1113 (2010)
PMID: 20729860 DOI: 10.1038/nsmb.1898

Abstact

Changing environmental conditions and lessening fresh water supplies have sparked intense interest in understanding and manipulating abscisic acid (ABA) signaling, which controls adaptive responses to drought and other abiotic stressors. We recently discovered a selective ABA agonist, pyrabactin, and used it to discover its primary target PYR1, the founding member of the PYR/PYL family of soluble ABA receptors. To understand pyrabactin's selectivity, we have taken a combined structural, chemical and genetic approach. We show that subtle differences between receptor binding pockets control ligand orientation between productive and nonproductive modes. Nonproductive binding occurs without gate closure and prevents receptor activation. Observations in solution show that these orientations are in rapid equilibrium that can be shifted by mutations to control maximal agonist activity. Our results provide a robust framework for the design of new agonists and reveal a new mechanism for agonist selectivity.

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