3NIO image
Deposition Date 2010-06-16
Release Date 2011-06-01
Last Version Date 2023-11-01
Entry Detail
PDB ID:
3NIO
Keywords:
Title:
Crystal structure of Pseudomonas aeruginosa guanidinobutyrase
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.25
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Guanidinobutyrase
Gene (Uniprot):gbuA
Chain IDs:A, B, C, D, E, F
Chain Length:319
Number of Molecules:6
Biological Source:Pseudomonas aeruginosa
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MLY A LYS N-DIMETHYL-LYSINE
Ligand Molecules
Primary Citation
Crystal structures of Pseudomonas aeruginosa guanidinobutyrase and guanidinopropionase, members of the ureohydrolase superfamily
J.Struct.Biol. 175 329 338 (2011)
PMID: 21600989 DOI: 10.1016/j.jsb.2011.05.002

Abstact

Pseudomonas aeruginosa guanidinobutyrase (GbuA) and guanidinopropionase (GpuA) catalyze the hydrolysis of 4-guanidinobutyrate and 3-guanidinopropionate, respectively. They belong to the ureohydrolase superfamily, which includes arginase, agmatinase, proclavaminate amidinohydrolase, and formiminoglutamase. In this study, we have determined the crystal structures of GbuA and GpuA from P. aeruginosa to provide a structural insight into their substrate specificity. Although GbuA and GpuA share a common structural fold of the typical ureohydrolase superfamily, they exhibit significant variations in two active site loops. Mutagenesis of Met161 of GbuA and Tyr157 of GpuA, both of which are located in the active site loop 1 and predicted to be involved in substrate recognition, significantly affected their enzymatic properties, implying their important roles in catalysis.

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Primary Citation of related structures