3NHD image
Entry Detail
PDB ID:
3NHD
Keywords:
Title:
GYVLGS segment 127-132 from human prion with V129
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2010-06-14
Release Date:
2010-08-04
Method Details:
Experimental Method:
Resolution:
1.92 Å
R-Value Free:
0.26
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 21 21 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Major prion protein
Mutations:M129V
Chain IDs:A, B
Chain Length:6
Number of Molecules:2
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Crystallographic studies of prion protein (PrP) segments suggest how structural changes encoded by polymorphism at residue 129 modulate susceptibility to human prion disease.
J.Biol.Chem. 285 29671 29675 (2010)
PMID: 20685658 DOI: 10.1074/jbc.C110.158303

Abstact

A single nucleotide polymorphism (SNP) in codon 129 of the human prion gene, leading to a change from methionine to valine at residue 129 of prion protein (PrP), has been shown to be a determinant in the susceptibility to prion disease. However, the molecular basis of this effect remains unexplained. In the current study, we determined crystal structures of prion segments having either Met or Val at residue 129. These 6-residue segments of PrP centered on residue 129 are "steric zippers," pairs of interacting β-sheets. Both structures of these "homozygous steric zippers" reveal direct intermolecular interactions between Met or Val in one sheet and the identical residue in the mating sheet. These two structures, plus a structure-based model of the heterozygous Met-Val steric zipper, suggest an explanation for the previously observed effects of this locus on prion disease susceptibility and progression.

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Disease

Primary Citation of related structures