3NGP image
Deposition Date 2010-06-12
Release Date 2010-09-08
Last Version Date 2023-09-06
Entry Detail
PDB ID:
3NGP
Title:
High resolution structure of alpha-spectrin SH3 domain mutant with a redesigned core
Biological Source:
Source Organism:
Gallus gallus (Taxon ID: 9031)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.08 Å
R-Value Free:
0.18
R-Value Work:
0.16
R-Value Observed:
0.16
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Spectrin alpha chain, brain
Gene (Uniprot):SPTAN1
Mutations:A11V, V23L, M25V, V44I,V58L,D48G
Chain IDs:A
Chain Length:62
Number of Molecules:1
Biological Source:Gallus gallus
Primary Citation
High-resolution structure of an alpha-spectrin SH3-domain mutant with a redesigned hydrophobic core.
Acta Crystallogr.,Sect.F 66 1023 1027 (2010)
PMID: 20823517 DOI: 10.1107/S1744309110030095

Abstact

The alpha-spectrin SH3 domain (Spc-SH3) is a small modular domain which has been broadly used as a model protein in folding studies and these studies have sometimes been supported by structural information obtained from the coordinates of Spc-SH3 mutants. The structure of B5/D48G, a multiple mutant designed to improve the hydrophobic core and as a consequence the protein stability, has been solved at 1 A resolution. The crystals belonged to the orthorhombic space group P2(1)2(1)2(1), with unit-cell parameters a=24.79, b=37.23, c=62.95 A. This mutant also bears a D48G substitution in the distal loop and this mutation has also been reported to increase the stability of the protein by itself. The structure of the B5/D48G mutant shows a highly packed hydrophobic core and a more ordered distal loop compared with previous Spc-SH3 structures.

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