3NBN image
Deposition Date 2010-06-03
Release Date 2010-11-03
Last Version Date 2024-10-30
Entry Detail
PDB ID:
3NBN
Title:
Crystal structure of a dimer of Notch Transcription Complex trimers on HES1 DNA
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.45 Å
R-Value Free:
0.29
R-Value Work:
0.25
R-Value Observed:
0.25
Space Group:
C 1 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Recombining binding protein suppressor of hairless
Gene (Uniprot):RBPJ
Chain IDs:A, D
Chain Length:433
Number of Molecules:2
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Neurogenic locus notch homolog protein 1
Gene (Uniprot):NOTCH1
Chain IDs:B, E
Chain Length:256
Number of Molecules:2
Biological Source:Homo sapiens
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Mastermind-like protein 1
Gene (Uniprot):MAML1
Chain IDs:C, F
Chain Length:63
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polydeoxyribonucleotide
Molecule:DNA, HES1 promoter
Chain IDs:G (auth: X)
Chain Length:37
Number of Molecules:1
Biological Source:
Polymer Type:polydeoxyribonucleotide
Molecule:DNA, HES1 promoter
Chain IDs:H (auth: Y)
Chain Length:37
Number of Molecules:1
Biological Source:
Ligand Molecules
Primary Citation
Structural and mechanistic insights into cooperative assembly of dimeric Notch transcription complexes.
Nat.Struct.Mol.Biol. 17 1312 1317 (2010)
PMID: 20972443 DOI: 10.1038/nsmb.1938

Abstact

Ligand-induced proteolysis of Notch produces an intracellular effector domain that transduces essential signals by regulating the transcription of target genes. This function relies on the formation of transcriptional activation complexes that include intracellular Notch, a Mastermind co-activator and the transcription factor CSL bound to cognate DNA. These complexes form higher-order assemblies on paired, head-to-head CSL recognition sites. Here we report the X-ray structure of a dimeric human Notch1 transcription complex loaded on the paired site from the human HES1 promoter. The small interface between the Notch ankyrin domains could accommodate DNA bending and untwisting to allow a range of spacer lengths between the two sites. Cooperative dimerization occurred on the human and mouse Hes5 promoters at a sequence that diverged from the CSL-binding consensus at one of the sites. These studies reveal how promoter organizational features control cooperativity and, thus, the responsiveness of different promoters to Notch signaling.

Legend

Protein

Chemical

Disease

Primary Citation of related structures
Feedback Form
Name
Email
Institute
Feedback