3N5K image
Entry Detail
PDB ID:
3N5K
Keywords:
Title:
Structure Of The (Sr)Ca2+-ATPase E2-AlF4- Form
Biological Source:
Source Organism:
PDB Version:
Deposition Date:
2010-05-25
Release Date:
2011-06-08
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.21
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 21 21 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Sarcoplasmic/endoplasmic reticulum calcium ATPase 1
Chain IDs:A, B
Chain Length:994
Number of Molecules:2
Biological Source:Oryctolagus cuniculus
Primary Citation
Ion pathways in the sarcoplasmic reticulum Ca2+-ATPase.
J.Biol.Chem. 288 10759 10765 (2013)
PMID: 23400778 DOI: 10.1074/jbc.R112.436550

Abstact

The sarco/endoplasmic reticulum Ca(2+)-ATPase (SERCA) is a transmembrane ion transporter belonging to the P(II)-type ATPase family. It performs the vital task of re-sequestering cytoplasmic Ca(2+) to the sarco/endoplasmic reticulum store, thereby also terminating Ca(2+)-induced signaling such as in muscle contraction. This minireview focuses on the transport pathways of Ca(2+) and H(+) ions across the lipid bilayer through SERCA. The ion-binding sites of SERCA are accessible from either the cytoplasm or the sarco/endoplasmic reticulum lumen, and the Ca(2+) entry and exit channels are both formed mainly by rearrangements of four N-terminal transmembrane α-helices. Recent improvements in the resolution of the crystal structures of rabbit SERCA1a have revealed a hydrated pathway in the C-terminal transmembrane region leading from the ion-binding sites to the cytosol. A comparison of different SERCA conformations reveals that this C-terminal pathway is exclusive to Ca(2+)-free E2 states, suggesting that it may play a functional role in proton release from the ion-binding sites. This is in agreement with molecular dynamics simulations and mutational studies and is in striking analogy to a similar pathway recently described for the related sodium pump. We therefore suggest a model for the ion exchange mechanism in P(II)-ATPases including not one, but two cytoplasmic pathways working in concert.

Legend

Protein

Chemical

Disease

Primary Citation of related structures