3MIW image
Deposition Date 2010-04-12
Release Date 2011-05-25
Last Version Date 2024-02-21
Entry Detail
PDB ID:
3MIW
Keywords:
Title:
Crystal Structure of Rotavirus NSP4
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.29
R-Value Work:
0.26
R-Value Observed:
0.26
Space Group:
P 42
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Non-structural glycoprotein 4
Chain IDs:A (auth: B), B (auth: C), C (auth: E), D (auth: G), E (auth: I), F (auth: A), G (auth: D), H (auth: F), I (auth: H), J
Chain Length:53
Number of Molecules:10
Biological Source:Human rotavirus G4
Ligand Molecules
Primary Citation
A new pentameric structure of rotavirus NSP4 revealed by molecular replacement.
Acta Crystallogr.,Sect.D 68 57 61 (2012)
PMID: 22194333 DOI: 10.1107/S0907444911049705

Abstact

The region spanning residues 95-146 of the rotavirus nonstructural protein NSP4 from the asymptomatic human strain ST3 has been purified and crystallized and diffraction data have been collected to a resolution of 2.6 Å. Several attempts to solve the structure by the molecular-replacement method using the available tetrameric structures of this domain were unsuccessful despite a sequence identity of 73% to the already known structures. A more systematic approach with a dimer as the search model led to an unexpected pentameric structure using the program Phaser. The various steps involved in arriving at this molecular-replacement solution, which unravelled a case of subtle variation between different oligomeric states unknown at the time of solving the structure, are presented in this paper.

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Primary Citation of related structures
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