3MEC image
Deposition Date 2010-03-31
Release Date 2010-05-12
Last Version Date 2023-09-06
Entry Detail
PDB ID:
3MEC
Keywords:
TRANSFERASE
Title:
HIV-1 Reverse Transcriptase in Complex with TMC125
Biological Source:
Source Organism:
HIV-1 M:B_HXB2R (Taxon ID: 11706)
Host Organism:
Escherichia coli
Method Details:
Experimental Method:
X-RAY DIFFRACTION
Resolution:
2.30 Å
R-Value Free:
0.27
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
C 2 2 21
3MEC validation report
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:p66 Reverse transcriptase
Gene (Uniprot):gag-pol
Chain IDs:A
Chain Length:560
Number of Molecules:1
Biological Source:HIV-1 M:B_HXB2R
UniProt ID:P04585 Pfam ID:PF00078, PF06817, PF06815, PF00075
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:p51 Reverse transcriptase
Gene (Uniprot):gag-pol
Chain IDs:B
Chain Length:440
Number of Molecules:1
Biological Source:HIV-1 M:B_HXB2R
UniProt ID:P04585 Pfam ID:PF00078, PF06817, PF06815, PF00075
Ligand Molecules
65B
SO4
Primary Citation
Crystal Structures of HIV-1 Reverse Transcriptase with Etravirine (TMC125) and Rilpivirine (TMC278): Implications for Drug Design.
J.Med.Chem. 53 4295 4299 (2010)
PMID: 20438081 DOI: 10.1021/jm1002233

Abstact

Diarylpyrimidine (DAPY) non-nucleoside reverse transcriptase inhibitors (NNRTIs) have inherent flexibility, helping to maintain activity against a wide range of resistance mutations. Crystal structures were determined with wild-type and K103N HIV-1 reverse transcriptase with etravirine (TMC125) and rilpivirine (TMC278). These structures reveal a similar binding mode for TMC125 and TMC278, whether bound to wild-type or K103N RT. Comparison to previously published structures reveals differences in binding modes for TMC125 and differences in protein conformation for TMC278.

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Disease

Primary Citation of related structures
3MED
3MEE
3MEG