3MBW image
Entry Detail
PDB ID:
3MBW
Title:
Crystal structure of the human ephrin A2 LBD and CRD domains in complex with ephrin A1
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2010-03-26
Release Date:
2010-06-09
Method Details:
Experimental Method:
Resolution:
2.81 Å
R-Value Free:
0.27
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
C 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Ephrin type-A receptor 2
Chain IDs:A
Chain Length:330
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:Ephrin-A1
Chain IDs:B
Chain Length:181
Number of Molecules:1
Biological Source:Homo sapiens
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN B ASN GLYCOSYLATION SITE
Ligand Molecules
Primary Citation
Architecture of Eph receptor clusters.
Proc.Natl.Acad.Sci.USA 107 10860 10865 (2010)
PMID: 20505120 DOI: 10.1073/pnas.1004148107

Abstact

Eph receptor tyrosine kinases and their ephrin ligands regulate cell navigation during normal and oncogenic development. Signaling of Ephs is initiated in a multistep process leading to the assembly of higher-order signaling clusters that set off bidirectional signaling in interacting cells. However, the structural and mechanistic details of this assembly remained undefined. Here we present high-resolution structures of the complete EphA2 ectodomain and complexes with ephrin-A1 and A5 as the base unit of an Eph cluster. The structures reveal an elongated architecture with novel Eph/Eph interactions, both within and outside of the Eph ligand-binding domain, that suggest the molecular mechanism underlying Eph/ephrin clustering. Structure-function analysis, by using site-directed mutagenesis and cell-based signaling assays, confirms the importance of the identified oligomerization interfaces for Eph clustering.

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Primary Citation of related structures