3M9Z image
Deposition Date 2010-03-23
Release Date 2011-04-06
Last Version Date 2024-11-27
Entry Detail
PDB ID:
3M9Z
Title:
Crystal Structure of extracellular domain of mouse NKR-P1A
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.70 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
I 41 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Killer cell lectin-like receptor subfamily B member 1A
Gene (Uniprot):Klrb1a
Chain IDs:A
Chain Length:139
Number of Molecules:1
Biological Source:Mus musculus
Ligand Molecules
Primary Citation
Molecular architecture of mouse activating NKR-P1 receptors.
J.Struct.Biol. 175 434 441 (2011)
PMID: 21600988 DOI: 10.1016/j.jsb.2011.05.001

Abstact

Receptors belonging to NKR-P1 family and their specific Clr ligands form an alternative missing self recognition system critical in immunity against tumors and viruses, elimination of tumor cells subjected to genotoxic stress, activation of T cell dependent immune response, and hypertension. The three-dimensional structure of the extracellular domain of the mouse natural killer (NK) cell receptor mNKR-P1Aex has been determined by X-ray diffraction. The core of the C-type lectin domain (CTLD) is homologous to the other CTLD receptors whereas one quarter of the domain forms an extended loop interacting tightly with a neighboring loop in the crystal. This domain swapping mechanism results in a compact interaction interface. A second dimerization interface resembles the known arrangement of other CTLD NK receptors. A functional dimeric form of the receptor is suggested, with the loop, evolutionarily conserved within this family, proposed to participate in interactions with ligands.

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Primary Citation of related structures