3M2M image
Deposition Date 2010-03-07
Release Date 2010-07-21
Last Version Date 2024-11-20
Entry Detail
PDB ID:
3M2M
Title:
Rat galectin-1 complex with lactose
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.95 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.23
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Galectin-1
Gene (Uniprot):Lgals1
Chain IDs:A, B, C, D, E, F, G, H
Chain Length:134
Number of Molecules:8
Biological Source:Rattus norvegicus
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
CSO A CYS S-HYDROXYCYSTEINE
Ligand Molecules
Peptide-like Molecules
PRD_900004
Primary Citation
Monovalent interactions of galectin-1.
Biochemistry 49 9518 9532 (2010)
PMID: 20873803 DOI: 10.1021/bi1009584

Abstact

Galectin-1, a β-galactoside binding lectin involved in immunoregulation and cancer, binds natural and many synthetic multivalent glycoconjugates with an apparent glycoside cluster effect, that is, affinity above and beyond what would be expected from the concentration of the determinant sugar. Here we have analyzed the mechanism of such cluster effects in solution at physiological concentration using a fluorescence anisotropy assay with a novel fluorescent high-affinity galectin-1 binding probe. The interaction of native dimeric and monomeric mutants of rat and human galectin-1 with mono- and divalent small molecules, fetuin, asialofetuin, and human serum glycoproteins was analyzed. Surprisingly, high-affinity binding did not depend much on the dimeric state of galectin-1 and thus is due mainly to monomeric interactions of a single carbohydrate recognition domain. The mechanism for this is unknown, but one possibility includes additional interactions that high-affinity ligands make with an extended binding site on the carbohydrate recognition domain. It follows that such weak additional interactions must be important for the biological function of galectin-1 and also for the design of galectin-1 inhibitors.

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Primary Citation of related structures