3LSW image
Deposition Date 2010-02-13
Release Date 2010-03-16
Last Version Date 2024-11-27
Entry Detail
PDB ID:
3LSW
Title:
Aniracetam bound to the ligand binding domain of GluA3
Biological Source:
Source Organism:
Rattus norvegicus (Taxon ID: 10116)
Mus musculus (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.75 Å
R-Value Free:
0.21
R-Value Work:
0.17
R-Value Observed:
0.18
Space Group:
P 2 2 21
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:GluA2 S1S2 domain
Gene (Uniprot):Gria3, Gria3
Chain IDs:A
Chain Length:258
Number of Molecules:1
Biological Source:Rattus norvegicus, Mus musculus
Primary Citation
Piracetam Defines a New Binding Site for Allosteric Modulators of alpha-Amino-3-hydroxy-5-methyl-4-isoxazole-propionic Acid (AMPA) Receptors.
J.Med.Chem. 53 2197 2203 (2010)
PMID: 20163115 DOI: 10.1021/jm901905j

Abstact

Glutamate receptors are the most prevalent excitatory neurotransmitter receptors in the vertebrate central nervous system and are important potential drug targets for cognitive enhancement and the treatment of schizophrenia. Allosteric modulators of AMPA receptors promote dimerization by binding to a dimer interface and reducing desensitization and deactivation. The pyrrolidine allosteric modulators, piracetam and aniracetam, were among the first of this class of drugs to be discovered. We have determined the structure of the ligand binding domain of the AMPA receptor subtypes GluA2 and GluA3 with piracetam and a corresponding structure of GluA3 with aniracetam. Both drugs bind to GluA2 and GluA3 in a very similar manner, suggesting little subunit specificity. However, the binding sites for piracetam and aniracetam differ considerably. Aniracetam binds to a symmetrical site at the center of the dimer interface. Piracetam binds to multiple sites along the dimer interface with low occupation, one of which is a unique binding site for potential allosteric modulators. This new site may be of importance in the design of new allosteric regulators.

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