3LPH image
Deposition Date 2010-02-05
Release Date 2010-12-08
Last Version Date 2024-04-03
Entry Detail
PDB ID:
3LPH
Keywords:
Title:
Crystal structure of the HIV-1 Rev dimer
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.50 Å
R-Value Free:
0.26
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 64 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Protein Rev
Gene (Uniprot):rev
Mutations:L12S,L60R
Chain IDs:A, B, C, D
Chain Length:72
Number of Molecules:4
Biological Source:Human immunodeficiency virus type 1
Primary Citation
Structural basis for cooperative RNA binding and export complex assembly by HIV Rev.
Nat.Struct.Mol.Biol. 17 1337 1342 (2010)
PMID: 20953181 DOI: 10.1038/nsmb.1902

Abstact

HIV replication requires nuclear export of unspliced viral RNAs to translate structural proteins and package genomic RNA. Export is mediated by cooperative binding of the Rev protein to the Rev response element (RRE) RNA, to form a highly specific oligomeric ribonucleoprotein (RNP) that binds to the Crm1 host export factor. To understand how protein oligomerization generates cooperativity and specificity for RRE binding, we solved the crystal structure of a Rev dimer at 2.5-Å resolution. The dimer arrangement organizes arginine-rich helices at the ends of a V-shaped assembly to bind adjacent RNA sites and structurally couple dimerization and RNA recognition. A second protein-protein interface arranges higher-order Rev oligomers to act as an adaptor to the host export machinery, with viral RNA bound to one face and Crm1 to another, the oligomers thereby using small, interconnected modules to physically arrange the RNP for efficient export.

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