3LL2 image
Deposition Date 2010-01-28
Release Date 2010-10-06
Last Version Date 2023-09-06
Entry Detail
PDB ID:
3LL2
Title:
Monomeric Griffithsin in Complex with a High-Mannose Branched Carbohydrate
Biological Source:
Source Organism:
Griffithsia (Taxon ID: 373036)
Host Organism:
Method Details:
Experimental Method:
Resolution:
0.97 Å
R-Value Free:
0.15
R-Value Work:
0.14
R-Value Observed:
0.14
Space Group:
I 41
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Griffithsin
Mutagens:Gly-Ser insertion after S16, L2S
Chain IDs:A
Chain Length:123
Number of Molecules:1
Biological Source:Griffithsia
Primary Citation
Monomerization of viral entry inhibitor griffithsin elucidates the relationship between multivalent binding to carbohydrates and anti-HIV activity.
Structure 18 1104 1115 (2010)
PMID: 20826337 DOI: 10.1016/j.str.2010.05.016

Abstact

Mutations were introduced to the domain-swapped homodimer of the antiviral lectin griffithsin (GRFT). Whereas several single and double mutants remained dimeric, insertion of either two or four amino acids at the dimerization interface resulted in a monomeric form of the protein (mGRFT). Monomeric character of the modified proteins was confirmed by sedimentation equilibrium ultracentrifugation and by their high resolution X-ray crystal structures, whereas their binding to carbohydrates was assessed by isothermal titration calorimetry. Cell-based antiviral activity assays utilizing different variants of mGRFT indicated that the monomeric form of the lectin had greatly reduced activity against HIV-1, suggesting that the antiviral activity of GRFT stems from crosslinking and aggregation of viral particles via multivalent interactions between GRFT and oligosaccharides present on HIV envelope glycoproteins. Atomic resolution crystal structure of a complex between mGRFT and nonamannoside revealed that a single mGRFT molecule binds to two different nonamannoside molecules through all three carbohydrate-binding sites present on the monomer.

Legend

Protein

Chemical

Disease

Primary Citation of related structures