ISDA

Deposition Date 2010-01-06

Release Date 2010-02-23

Last Version Date 2023-09-06

Entry Detail

PDB ID:

3LAM

Keywords:

TRANSFERASE

Title:

Crystal structure of HIV-1 reverse transcriptase in complex with N1-propyl pyrimidinedione non-nucleoside inhibitor

Biological Source:

Source Organism:

Human immunodeficiency virus type 1 (Taxon ID: 11706)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.76 Å

R-Value Free:

0.28

R-Value Work:

0.23

R-Value Observed:

0.23

Space Group:

C 2 2 21

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:HIV Reverse transcriptase
Gene (Uniprot):gag-pol
Chain IDs:A, B
Chain Length:560
Number of Molecules:2
Biological Source:Human immunodeficiency virus type 1

UniProt ID:P04585 Pfam ID:PF00078, PF06817, PF06815, PF00075

Ligand Molecules

KRP

SO4

Primary Citation

N1-Alkyl pyrimidinediones as non-nucleoside inhibitors of HIV-1 reverse transcriptase.

Mitchell, M.L, Son, J.C, Guo, H, Im, Y.A, Cho, E.J, Wang, J, Hayes, J, Wang, M, Paul, A, Lansdon, E.B, Chen, J.M, Graupe, D, Rhodes, G, He, G.X, Geleziunas, R, Xu, L, Kim, C.U.Show

Bioorg.Med.Chem.Lett. 20 1589 1592 (2010)

PMID: 20138513 DOI: 10.1016/j.bmcl.2010.01.085

Abstact

A series of N1-alkyl pyrimidinediones were designed, synthesized and evaluated as HIV-1 non-nucleoside reverse transcriptase inhibitors (NNRTIs). Our efforts identified compound 10b, which represents the lead compound in this series with pharmacokinetics and antiviral potency that may support once-daily dosing.

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Protein

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Primary Citation of related structures