3L9M image
Entry Detail
PDB ID:
3L9M
Title:
Crystal structure of PKAB3 (pka triple mutant V123A, L173M, Q181K) with compound 18
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2010-01-05
Release Date:
2011-01-19
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.27
R-Value Work:
0.22
Space Group:
C 1 2 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:cAMP-dependent protein kinase catalytic subunit alpha
Mutations:V123A, L173M, Q181K
Chain IDs:A, C (auth: B)
Chain Length:351
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Description:cAMP-dependent protein kinase inhibitor alpha
Chain IDs:B (auth: C), D
Chain Length:20
Number of Molecules:2
Biological Source:Homo sapiens
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
SEP A SER PHOSPHOSERINE
TPO A THR PHOSPHOTHREONINE
Ligand Molecules
Primary Citation
Azole-based inhibitors of AKT/PKB for the treatment of cancer.
Bioorg.Med.Chem.Lett. 20 1559 1564 (2010)
PMID: 20137943 DOI: 10.1016/j.bmcl.2010.01.067

Abstact

Through a combination of screening and structure-based rational design, we have discovered a series of N(1)-(5-(heterocyclyl)-thiazol-2-yl)-3-(4-trifluoromethylphenyl)-1,2-propanediamines that were developed into potent ATP competitive inhibitors of AKT. Studies of linker strand-binding adenine isosteres identified SAR trends in potency and selectivity that were consistent with binding interactions observed in structures of the inhibitors bound to AKT1 and to the counter-screening target PKA. One compound was shown to have acceptable pharmacokinetic properties and to be a potent inhibitor of AKT signaling and of in vivo xenograft tumor growth in a preclinical model of glioblastoma.

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Primary Citation of related structures