3L3P image
Deposition Date 2009-12-17
Release Date 2010-09-08
Last Version Date 2023-11-01
Entry Detail
PDB ID:
3L3P
Keywords:
Title:
Crystal structure of the C-terminal domain of Shigella type III effector IpaH9.8, with a novel domain swap
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.20 Å
R-Value Free:
0.31
R-Value Work:
0.28
R-Value Observed:
0.29
Space Group:
P 62 2 2
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:IpaH9.8
Chain IDs:A
Chain Length:293
Number of Molecules:1
Biological Source:Shigella flexneri
Ligand Molecules
Primary Citation
A disulfide driven domain swap switches off the activity of Shigella IpaH9.8 E3 ligase
Febs Lett. 584 4163 4168 (2010)
PMID: 20831869 DOI: 10.1016/j.febslet.2010.09.006

Abstact

We show that the monomeric form of Shigella IpaH9.8 E3 ligase catalyses the ubiquitination of human U2AF35 in vitro, providing a molecular mechanism for the observed in vivo effect. We further discover that under non-reducing conditions IpaH9.8 undergoes a domain swap driven by the formation of a disulfide bridge involving the catalytic cysteine and that this dimer is unable to catalyse the ubiquitination of U2AF35. The crystal structure of the domain-swapped dimer is presented. The redox inactivation of IpaH9.8 could be a mechanism of regulating the activity of the IpaH9.8 E3 ligase in response to cell damage so that the host cell in which the bacteria resides is maintained in a benign state suitable for bacterial survival.

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Primary Citation of related structures