3KZA image
Deposition Date 2009-12-08
Release Date 2010-12-22
Last Version Date 2024-11-13
Entry Detail
PDB ID:
3KZA
Title:
Crystal structure of Gyuba, a patched chimera of b-lactglobulin
Biological Source:
Source Organism:
Equus caballus (Taxon ID: 9796)
Bos taurus (Taxon ID: 9913)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.28
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
P 65
Macromolecular Entities
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Beta-lactoglobulin
Gene (Uniprot):LGB, LGB1
Chain IDs:A, B
Chain Length:162
Number of Molecules:2
Biological Source:Equus caballus, Bos taurus
Primary Citation
Structure and stability of Gyuba, a patched chimera of b-lactoglobulin
Protein Sci. 20 1867 1875 (2011)
PMID: 21853497 DOI: 10.1002/pro.720

Abstact

β-lactoglobulin (LG) contains nine β-strands (strands A-I) and one α-helix. Strands A-H form a β-barrel. At neutral pH, equine LG (ELG) is monomeric, whereas bovine LG (BLG) is dimeric, and the I-strands of its two subunits form an intermolecular β-sheet. We previously constructed a chimeric ELG in which the sequence of the I-strand was replaced with that of BLG. This chimera did not dimerize. For this study, we constructed the new chimera we call Gyuba (which means cow and horse in Japanese). The amino acid sequence of Gyuba includes the sequences of the BLG secondary structures and those of the ELG loops. The crystal structure of Gyuba is very similar to that of BLG and indicates that Gyuba dimerizes via the intermolecular β-sheet formed by the two I-strands. Thus, the entire arrangement of the secondary structural elements is important for LG dimer formation.

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