3KX2 image
Deposition Date 2009-12-02
Release Date 2010-01-26
Last Version Date 2024-03-20
Entry Detail
PDB ID:
3KX2
Keywords:
Title:
Crystal structure of Prp43p in complex with ADP
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.24
R-Value Work:
0.20
R-Value Observed:
0.20
Space Group:
P 32 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP43
Gene (Uniprot):PRP43
Chain IDs:A (auth: B), B (auth: A)
Chain Length:767
Number of Molecules:2
Biological Source:Saccharomyces cerevisiae
Primary Citation
Structural basis for the function of DEAH helicases
Embo Rep. 11 180 186 (2010)
PMID: 20168331 DOI: 10.1038/embor.2010.11

Abstact

DEAH helicases participate in pre-messenger RNA splicing and ribosome biogenesis. The structure of yeast Prp43p-ADP reveals the homology of DEAH helicases to DNA helicases and the presence of an oligonucleotide-binding motif. A beta-hairpin from the second RecA domain is wedged between two carboxy-terminal domains and blocks access to the occluded RNA binding site formed by the RecA domains and a C-terminal domain. ATP binding and hydrolysis are likely to induce conformational changes in the hairpin that are important for RNA unwinding or ribonucleoprotein remodelling. The structure of Prp43p provides the framework for functional and genetic analysis of all DEAH helicases.

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Primary Citation of related structures