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3KWI image
Deposition Date 2009-12-01
Release Date 2010-02-02
Last Version Date 2023-09-06
Entry Detail
PDB ID:
3KWI
Keywords:
Title:
X-ray structure of NS1 effector domain W187Y mutant
Biological Source:
Source Organism(s):
Expression System(s):
Method Details:
Experimental Method:
Resolution:
2.21 Å
R-Value Free:
0.25
R-Value Work:
0.22
R-Value Observed:
0.22
Space Group:
P 21 21 21
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Non-structural protein 1
Gene (Uniprot):NS
Mutagens:W187Y
Chain IDs:A, B
Chain Length:141
Number of Molecules:2
Biological Source:Influenza A virus
Primary Citation
X-ray structures of NS1 effector domain mutants.
Arch.Biochem.Biophys. 494 198 204 (2010)
PMID: 19995550 DOI: 10.1016/j.abb.2009.12.008

Abstact

The influenza A virus nonstructural protein NS1 is a multifunctional dimeric protein that acts as a potent inhibitor of the host cellular antiviral state. The C-terminal effector domain of NS1 binds host proteins, including CPSF30, and is a target for the development of new antiviral drugs. Here we present crystallographic structures of two mutant effector domains, W187Y and W187A, of influenza A/Udorn/72 virus. Unlike wild-type, the mutants behave exclusively as monomers in solution based on gel filtration data and light scattering. The W187Y mutant is able to bind CPSF30 with a binding affinity close to the wild-type protein; that is, it retains a receptor site for aromatic ligands nearly identical to the wild-type. Therefore, this monomeric mutant protein could serve as a drug target for a high throughput inhibitor screening assays, since its binding pocket is unoccupied in solution and potentially more accessible to small molecule ligands.

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Primary Citation of related structures
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