3KQG image
Deposition Date 2009-11-17
Release Date 2010-02-23
Last Version Date 2024-11-20
Entry Detail
PDB ID:
3KQG
Keywords:
Title:
Trimeric Structure of Langerin
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.30 Å
R-Value Free:
0.23
R-Value Work:
0.18
R-Value Observed:
0.18
Space Group:
P 1 21 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:C-type lectin domain family 4 member K
Gene (Uniprot):CD207
Mutagens:V147A,V278A
Chain IDs:A, B, C, D, E, F
Chain Length:182
Number of Molecules:6
Biological Source:Homo sapiens
Ligand Molecules
Primary Citation
Trimeric structure of langerin.
J.Biol.Chem. 285 13285 13293 (2010)
PMID: 20181944 DOI: 10.1074/jbc.M109.086058

Abstact

Langerin, an endocytic receptor of Langerhans cells, binds pathogens such as human immunodeficiency virus by recognition of surface glycoconjugates and mediates their internalization into Birbeck granules. Langerin has an extracellular region consisting of a C-type carbohydrate-recognition domain (CRD) and a neck region that stabilizes formation of trimers. As in many other C-type lectins, oligomerization is required for high affinity binding to glycan ligands and is also likely to be important for determining specificity. To facilitate structural analysis of the human langerin trimer, a truncated form of the extracellular region, consisting of part of the neck and the CRD, has been characterized. Like the full-length protein, truncated langerin exists as a stable trimer in solution. Glycan array screening with the trimeric fragment shows that high mannose oligosaccharides are the best ligands for langerin. Structural analysis of the trimeric fragment of langerin confirms that the neck region forms a coiled-coil of alpha-helices. Multiple interactions between the neck region and the CRDs make the trimer a rigid unit with the three CRDs in fixed positions and the primary sugar-binding sites separated by a distance of 42 A. The fixed orientation of the sugar-binding sites in the trimer is likely to place constraints on the ligands that can be bound by langerin.

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Primary Citation of related structures