3KO1 image
Deposition Date 2009-11-12
Release Date 2010-11-03
Last Version Date 2023-11-01
Entry Detail
PDB ID:
3KO1
Keywords:
Title:
Cystal structure of thermosome from Acidianus tengchongensis strain S5
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.70 Å
R-Value Free:
0.28
R-Value Work:
0.27
R-Value Observed:
0.27
Space Group:
C 1 2 1
Macromolecular Entities
Structures with similar UniProt ID
Protein Blast
Polymer Type:polypeptide(L)
Molecule:Chaperonin
Chain IDs:A, B, C, D, E, F, G, H, I
Chain Length:553
Number of Molecules:9
Biological Source:Acidianus tengchongensis
Ligand Molecules
Primary Citation
Crystal structure of group II chaperonin in the open state.
Structure 18 1270 1279 (2010)
PMID: 20947016 DOI: 10.1016/j.str.2010.07.009

Abstact

Thermosomes are group II chaperonins responsible for protein refolding in an ATP-dependent manner. Little is known regarding the conformational changes of thermosomes during their functional cycle due to a lack of high-resolution structure in the open state. Here, we report the first complete crystal structure of thermosome (rATcpnβ) in the open state from Acidianus tengchongensis. There is a ∼30° rotation of the apical and lid domains compared with the previous closed structure. Besides, the structure reveals a conspicuous hydrophobic patch in the lid domain, and residues locating in this patch are conserved across species. Both the closed and open forms of rATcpnβ were also reconstructed by electron microscopy (EM). Structural fitting revealed the detailed conformational change from the open to the closed state. Structural comparison as well as protease K digestion indicated only ATP binding without hydrolysis does not induce chamber closure of thermosome.

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Chemical

Disease

Primary Citation of related structures