3KIE image
Deposition Date 2009-11-01
Release Date 2010-04-28
Last Version Date 2023-09-06
Entry Detail
PDB ID:
3KIE
Keywords:
Title:
Crystal structure of adeno-associated virus serotype 3B
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.00 Å
R-Value Free:
0.26
R-Value Work:
0.23
R-Value Observed:
0.23
Space Group:
H 3
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Capsid protein VP1
Chain IDs:A, B, C, D, E, F, G, H, I, J, K, L, M, N, O, P, Q, R, S, T
Chain Length:736
Number of Molecules:20
Biological Source:Adeno-associated virus 3B
Ligand Molecules
Primary Citation
The structure of adeno-associated virus serotype 3B (AAV-3B): insights into receptor binding and immune evasion.
Virology 403 26 36 (2010)
PMID: 20444480 DOI: 10.1016/j.virol.2010.03.027

Abstact

Adeno-associated viruses (AAVs) are leading candidate vectors for human gene therapy. AAV serotypes have broad cellular tropism and use a variety of cellular receptors. AAV serotype 3 binds to heparan sulfate proteoglycan prior to cell entry and is serologically distinct from other serotypes. The capsid features that distinguish AAV-3B from other serotypes are poorly understood. The structure of AAV-3B has been determined to 2.6A resolution from twinned crystals of an infectious virus. The most distinctive structural features are located in regions implicated in receptor and antibody binding, providing insights into the cell entry mechanisms and antigenic nature of AAVs. We show that AAV-3B has a lower affinity for heparin than AAV-2, which can be rationalized by the distinct features of the AAV-3B capsid. The structure of AAV-3B provides an additional foundation for the future engineering of improved gene therapy vectors with modified receptor binding or antigenic characteristics.

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Primary Citation of related structures