ISDA

Deposition Date 2009-10-27

Release Date 2009-12-29

Last Version Date 2024-02-21

Entry Detail

PDB ID:

3KF7

Keywords:

TRANSFERASE

Title:

Crystal Structure of Human p38alpha Complexed With a Triazolopyrimidine compound

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.00 Å

R-Value Free:

0.27

R-Value Work:

0.23

R-Value Observed:

0.23

Space Group:

P 21 21 21

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Mitogen-activated protein kinase 14
Gene (Uniprot):MAPK14
Chain IDs:A
Chain Length:360
Number of Molecules:1
Biological Source:Homo sapiens

UniProt ID:Q16539 Pfam ID:PF00069 EC:2.7.11.24

Ligand Molecules

L9G

Primary Citation

Continued exploration of the triazolopyridine scaffold as a platform for p38 MAP kinase inhibition.

Jerome, K.D, Rucker, P.V, Xing, L, Shieh, H.S, Baldus, J.E, Selness, S.R, Letavic, M.A, Braganza, J.F, McClure, K.F.Show

Bioorg.Med.Chem.Lett. 20 469 473 (2010)

PMID: 19969459 DOI: 10.1016/j.bmcl.2009.11.114

Abstact

The structure based drug design, synthesis and structure-activity relationship of a series of C6 sulfur linked triazolopyridine based p38 inhibitors are described. The metabolic deficiencies of this series were overcome through changes in the C6 linker from sulfur to methylene, which was predicted by molecular modeling to be bioisosteric. X-ray of the ethylene linked compound 61 confirmed the predicted binding orientation of the scaffold in the p38 enzyme.

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Primary Citation of related structures