ISDA

Deposition Date 2009-10-15

Release Date 2010-02-09

Last Version Date 2024-02-21

Entry Detail

PDB ID:

3K99

Keywords:

CHAPERONE

Title:

HSP90 N-terminal domain in complex with 4-(1,3-dihydro-2H-isoindol-2-ylcarbonyl)benzene-1,3-diol

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.10 Å

R-Value Free:

0.24

R-Value Work:

0.20

R-Value Observed:

0.20

Space Group:

P 21 21 21

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Macromolecular Entities

Structures with similar UniProt ID

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Heat shock protein HSP 90-alpha
Gene (Uniprot):HSP90AA1
Chain IDs:A, B, C, D
Chain Length:232
Number of Molecules:4
Biological Source:Homo sapiens

UniProt ID:P07900 Pfam ID:PF13589 EC:3.6.4.10

Ligand Molecules

PFT

Primary Citation

Dihydroxyphenylisoindoline amides as orally bioavailable inhibitors of the heat shock protein 90 (hsp90) molecular chaperone.

Kung, P.P, Huang, B, Zhang, G, Zhou, J.Z, Wang, J, Digits, J.A, Skaptason, J, Yamazaki, S, Neul, D, Zientek, M, Elleraas, J, Mehta, P, Yin, M.J, Hickey, M.J, Gajiwala, K.S, Rodgers, C, Davies, J.F, Gehring, M.R.Show

J.Med.Chem. 53 499 503 (2010)

PMID: 19908836 DOI: 10.1021/jm901209q

Abstact

The discovery and optimization of potency and metabolic stability of a novel class of dihyroxyphenylisoindoline amides as Hsp90 inhibitors are presented. Optimization of a screening hit using structure-based design and modification of log D and chemical structural features led to the identification of a class of orally bioavailable non-quinone-containing Hsp90 inhibitors. This class is exemplified by 14 and 15, which possess improved cell potency and pharmacokinetic profiles compared with the original screening hit.

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Primary Citation of related structures