3K5R image
Deposition Date 2009-10-07
Release Date 2010-03-02
Last Version Date 2024-02-21
Entry Detail
PDB ID:
3K5R
Title:
Crystal Structure of mouse T-cadherin EC1 EC2
Biological Source:
Source Organism:
Mus musculus (Taxon ID: 10090)
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.00 Å
R-Value Free:
0.25
R-Value Work:
0.21
R-Value Observed:
0.21
Space Group:
H 3 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Cadherin 13
Chain IDs:A, B
Chain Length:218
Number of Molecules:2
Biological Source:Mus musculus
Primary Citation
T-cadherin structures reveal a novel adhesive binding mechanism
Nat.Struct.Mol.Biol. 17 339 347 (2010)
PMID: 20190755 DOI: 10.1038/nsmb.1781

Abstact

Vertebrate genomes encode 19 classical cadherins and about 100 nonclassical cadherins. Adhesion by classical cadherins depends on binding interactions in their N-terminal EC1 domains, which swap N-terminal beta-strands between partner molecules from apposing cells. However, strand-swapping sequence signatures are absent from nonclassical cadherins, raising the question of how these proteins function in adhesion. Here, we show that T-cadherin, a glycosylphosphatidylinositol (GPI)-anchored cadherin, forms dimers through an alternative nonswapped interface near the EC1-EC2 calcium-binding sites. Mutations within this interface ablate the adhesive capacity of T-cadherin. These nonadhesive T-cadherin mutants also lose the ability to regulate neurite outgrowth from T-cadherin-expressing neurons. Our findings reveal the likely molecular architecture of the T-cadherin homophilic interface and its requirement for axon outgrowth regulation. The adhesive binding mode used by T-cadherin may also be used by other nonclassical cadherins.

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