3K4Q image
Deposition Date 2009-10-06
Release Date 2010-06-30
Last Version Date 2024-10-30
Entry Detail
PDB ID:
3K4Q
Keywords:
Title:
Aspergillus niger Phytase in complex with myo-inositol hexakis sulfate
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
2.20 Å
R-Value Free:
0.25
R-Value Work:
0.19
R-Value Observed:
0.20
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:3-phytase A
Gene (Uniprot):phyA
Chain IDs:A, B
Chain Length:444
Number of Molecules:2
Biological Source:Aspergillus niger
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN A ASN GLYCOSYLATION SITE
Primary Citation
The structure of Aspergillus niger phytase PhyA in complex with a phytate mimetic
Biochem.Biophys.Res.Commun. 397 745 749 (2010)
PMID: 20541524 DOI: 10.1016/j.bbrc.2010.06.024

Abstact

Phytases hydrolyse the phosphomonoesters of phytate (myo-inositol-1,2,3,4,5,6-hexakis phosphate) and thus find uses in plant and animal production through the mobilisation of phosphorus from this source. The structure of partially deglycosylated Aspergillus niger PhyA is presented in apo form and in complex with the potent inhibitor myo-inositol-1,2,3,4,5,6-hexakis sulfate, which by analogy with phytate provides a snapshot of the Michaelis complex. The structure explains the enzyme's preference for the 3'-phosphate of phytate. The apo-and inhibitor-bound forms are similar and no induced-fit mechanism operates. Furthermore the enzyme structure is apparently unaffected by the presence of glycosides on the surface. The new structures of A. niger PhyA are discussed in the context of protein engineering studies aimed at modulating pH preference and stability.

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Primary Citation of related structures