3JZT image
Deposition Date 2009-09-24
Release Date 2010-01-12
Last Version Date 2024-11-20
Entry Detail
PDB ID:
3JZT
Title:
Structure of a cubic crystal form of X (ADRP) domain from FCoV with ADP-ribose
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
3.91 Å
R-Value Free:
0.23
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
P 21 3
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:macro domain of Non-structural protein 3
Gene (Uniprot):rep
Chain IDs:A, B, C, D, E, F, G, H
Chain Length:168
Number of Molecules:8
Biological Source:Feline coronavirus
Primary Citation
Structure of the X (ADRP) domain of nsp3 from feline coronavirus
Acta Crystallogr.,Sect.D 65 1292 1300 (2009)
PMID: 19966415 DOI: 10.1107/S0907444909040074

Abstact

The structure of the X (or ADRP) domain of a pathogenic variant of feline coronavirus (FCoV) has been determined in tetragonal and cubic crystal forms to 3.1 and 2.2 A resolution, respectively. In the tetragonal crystal form, glycerol-3-phosphate was observed in the ADP-ribose-binding site. Both crystal forms contained large solvent channels and had a solvent content of higher than 70%. Only very weak binding of this domain to ADP-ribose was detected in vitro. However, the structure with ADP-ribose bound was determined in the cubic crystal form at 3.9 A resolution. The structure of the FCoV X domain had the expected macro-domain fold and is the first structure of this domain from a coronavirus belonging to subgroup 1a.

Legend

Protein

Chemical

Disease

Primary Citation of related structures