3JQA image
Entry Detail
PDB ID:
3JQA
Keywords:
Title:
Crystal structure of pteridine reductase 1 (PTR1) from Trypanosoma brucei in ternary complex with cofactor (NADP+) and inhibitor 2-amino-1,9-dihydro-6H-purine-6-thione (DX4)
Biological Source:
Source Organism:
Host Organism:
PDB Version:
Deposition Date:
2009-09-06
Release Date:
2009-12-08
Method Details:
Experimental Method:
Resolution:
1.90 Å
R-Value Free:
0.18
R-Value Work:
0.14
R-Value Observed:
0.14
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Description:Pteridine reductase 1
Chain IDs:A
Chain Length:288
Number of Molecules:1
Biological Source:Trypanosoma brucei
Polymer Type:polypeptide(L)
Description:Pteridine reductase 1
Chain IDs:B, C
Chain Length:288
Number of Molecules:2
Biological Source:Trypanosoma brucei
Polymer Type:polypeptide(L)
Description:Pteridine reductase 1
Chain IDs:D
Chain Length:288
Number of Molecules:1
Biological Source:Trypanosoma brucei
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
CSX B CYS S-OXY CYSTEINE
Primary Citation
Structure-based design of pteridine reductase inhibitors targeting african sleeping sickness and the leishmaniases.
J.Med.Chem. 53 221 229 (2010)
PMID: 19916554 DOI: 10.1021/jm901059x

Abstact

Pteridine reductase (PTR1) is a target for drug development against Trypanosoma and Leishmania species, parasites that cause serious tropical diseases and for which therapies are inadequate. We adopted a structure-based approach to the design of novel PTR1 inhibitors based on three molecular scaffolds. A series of compounds, most newly synthesized, were identified as inhibitors with PTR1-species specific properties explained by structural differences between the T. brucei and L. major enzymes. The most potent inhibitors target T. brucei PTR1, and two compounds displayed antiparasite activity against the bloodstream form of the parasite. PTR1 contributes to antifolate drug resistance by providing a molecular bypass of dihydrofolate reductase (DHFR) inhibition. Therefore, combining PTR1 and DHFR inhibitors might improve therapeutic efficacy. We tested two new compounds with known DHFR inhibitors. A synergistic effect was observed for one particular combination highlighting the potential of such an approach for treatment of African sleeping sickness.

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Primary Citation of related structures