3J9P image
Deposition Date 2015-02-14
Release Date 2015-04-08
Last Version Date 2024-05-15
Entry Detail
PDB ID:
3J9P
Title:
Structure of the TRPA1 ion channel determined by electron cryo-microscopy
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
4.24 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Maltose-binding periplasmic protein, Transient receptor potential cation channel subfamily A member 1 chimera
Gene (Uniprot):TRPA1, malE
Chain IDs:A (auth: D), B (auth: A), C (auth: B), D (auth: C)
Chain Length:1528
Number of Molecules:4
Biological Source:Escherichia coli, Homo sapiens
Ligand Molecules
Primary Citation
Structure of the TRPA1 ion channel suggests regulatory mechanisms.
Nature 520 511 517 (2015)
PMID: 25855297 DOI: 10.1038/nature14367

Abstact

The TRPA1 ion channel (also known as the wasabi receptor) is a detector of noxious chemical agents encountered in our environment or produced endogenously during tissue injury or drug metabolism. These include a broad class of electrophiles that activate the channel through covalent protein modification. TRPA1 antagonists hold potential for treating neurogenic inflammatory conditions provoked or exacerbated by irritant exposure. Despite compelling reasons to understand TRPA1 function, structural mechanisms underlying channel regulation remain obscure. Here we use single-particle electron cryo- microscopy to determine the structure of full-length human TRPA1 to ∼4 Å resolution in the presence of pharmacophores, including a potent antagonist. Several unexpected features are revealed, including an extensive coiled-coil assembly domain stabilized by polyphosphate co-factors and a highly integrated nexus that converges on an unpredicted transient receptor potential (TRP)-like allosteric domain. These findings provide new insights into the mechanisms of TRPA1 regulation, and establish a blueprint for structure-based design of analgesic and anti-inflammatory agents.

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Primary Citation of related structures