3J31 image
Deposition Date 2013-02-18
Release Date 2013-05-01
Last Version Date 2024-02-21
Entry Detail
PDB ID:
3J31
Keywords:
Title:
Life in the extremes: atomic structure of Sulfolobus Turreted Icosahedral Virus
Biological Source:
Source Organism:
Method Details:
Experimental Method:
Resolution:
4.50 Å
Aggregation State:
PARTICLE
Reconstruction Method:
SINGLE PARTICLE
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Coat protein
Gene (Uniprot):B345
Chain IDs:C (auth: A), D (auth: B), E (auth: C), F (auth: D), G (auth: E), H (auth: F), I (auth: G), J (auth: H), K (auth: I), L (auth: J), M (auth: K), N (auth: L), O (auth: M), P (auth: N), Q (auth: O)
Chain Length:345
Number of Molecules:15
Biological Source:Sulfolobus turreted icosahedral virus
Polymer Type:polypeptide(L)
Molecule:C381 turret protein
Gene (Uniprot):C381
Chain IDs:R (auth: P)
Chain Length:381
Number of Molecules:1
Biological Source:Sulfolobus turreted icosahedral virus
Polymer Type:polypeptide(L)
Molecule:A223 penton base
Gene (Uniprot):A223
Chain IDs:A (auth: Q)
Chain Length:223
Number of Molecules:1
Biological Source:Sulfolobus turreted icosahedral virus
Polymer Type:polypeptide(L)
Molecule:A55 membrane protein
Chain IDs:B (auth: R)
Chain Length:15
Number of Molecules:1
Biological Source:Sulfolobus turreted icosahedral virus
Ligand Molecules
Primary Citation
Atomic structure of the 75 MDa extremophile Sulfolobus turreted icosahedral virus determined by CryoEM and X-ray crystallography.
Proc.Natl.Acad.Sci.USA 110 5504 5509 (2013)
PMID: 23520050 DOI: 10.1073/pnas.1300601110

Abstact

Sulfolobus turreted icosahedral virus (STIV) was isolated in acidic hot springs where it infects the archeon Sulfolobus solfataricus. We determined the STIV structure using near-atomic resolution electron microscopy and X-ray crystallography allowing tracing of structural polypeptide chains and visualization of transmembrane proteins embedded in the viral membrane. We propose that the vertex complexes orchestrate virion assembly by coordinating interactions of the membrane and various protein components involved. STIV shares the same coat subunit and penton base protein folds as some eukaryotic and bacterial viruses, suggesting that they derive from a common ancestor predating the divergence of the three kingdoms of life. One architectural motif (β-jelly roll fold) forms virtually the entire capsid (distributed in three different gene products), indicating that a single ancestral protein module may have been at the origin of its evolution.

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Primary Citation of related structures