3J2Q image
Deposition Date 2012-12-11
Release Date 2013-09-11
Last Version Date 2024-11-20
Entry Detail
PDB ID:
3J2Q
Keywords:
Title:
Model of membrane-bound factor VIII organized in 2D crystals
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Host Organism:
Method Details:
Experimental Method:
R-Value Free:
['NA'].00
R-Value Work:
['NA'].00
R-Value Observed:
['NA'].00
Space Group:
P 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Coagulation factor VIII heavy chain
Gene (Uniprot):F8
Chain IDs:A
Chain Length:754
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:Coagulation factor VIII light chain
Gene (Uniprot):F8
Chain IDs:B
Chain Length:684
Number of Molecules:1
Biological Source:Homo sapiens
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
ASN B ASN GLYCOSYLATION SITE
Primary Citation
Domain organization of membrane-bound factor VIII.
Biopolymers 99 448 459 (2013)
PMID: 23616213 DOI: 10.1002/bip.22199

Abstact

Factor VIII (FVIII) is the blood coagulation protein which when defective or deficient causes for hemophilia A, a severe hereditary bleeding disorder. Activated FVIII (FVIIIa) is the cofactor to the serine protease factor IXa (FIXa) within the membrane-bound Tenase complex, responsible for amplifying its proteolytic activity more than 100,000 times, necessary for normal clot formation. FVIII is composed of two noncovalently linked peptide chains: a light chain (LC) holding the membrane interaction sites and a heavy chain (HC) holding the main FIXa interaction sites. The interplay between the light and heavy chains (HCs) in the membrane-bound state is critical for the biological efficiency of FVIII. Here, we present our cryo-electron microscopy (EM) and structure analysis studies of human FVIII-LC, when helically assembled onto negatively charged single lipid bilayer nanotubes. The resolved FVIII-LC membrane-bound structure supports aspects of our previously proposed FVIII structure from membrane-bound two-dimensional (2D) crystals, such as only the C2 domain interacts directly with the membrane. The LC is oriented differently in the FVIII membrane-bound helical and 2D crystal structures based on EM data, and the existing X-ray structures. This flexibility of the FVIII-LC domain organization in different states is discussed in the light of the FVIIIa-FIXa complex assembly and function.

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