3IZ0 image
Deposition Date 2010-08-09
Release Date 2010-10-13
Last Version Date 2024-02-21
Entry Detail
PDB ID:
3IZ0
Keywords:
Title:
Human Ndc80 Bonsai Decorated Microtubule
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
Bos taurus (Taxon ID: 9913)
Host Organism:
Method Details:
Experimental Method:
Resolution:
8.60 Å
Aggregation State:
FILAMENT
Reconstruction Method:
HELICAL
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:alpha tubulin, Chain A from PDB 1JFF
Chain IDs:A
Chain Length:451
Number of Molecules:1
Biological Source:Bos taurus
Polymer Type:polypeptide(L)
Molecule:beta tubulin, Chain B from PDB 1JFF
Chain IDs:B
Chain Length:445
Number of Molecules:1
Biological Source:Bos taurus
Polymer Type:polypeptide(L)
Molecule:NDC80-SPC25 chimera protein, Chain B from PDB 2VE7 (Ndc80 bonsai)
Gene (Uniprot):SPC25
Chain IDs:C, E
Chain Length:315
Number of Molecules:2
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:NUF2-SPC24 chimera protein, Chain D from PDB 2VE7 (Ndc80 bonsai)
Chain IDs:D, F
Chain Length:250
Number of Molecules:2
Biological Source:Homo sapiens
Primary Citation
The Ndc80 kinetochore complex forms oligomeric arrays along microtubules.
Nature 467 805 810 (2010)
PMID: 20944740 DOI: 10.1038/nature09423

Abstact

The Ndc80 complex is a key site of regulated kinetochore-microtubule attachment (a process required for cell division), but the molecular mechanism underlying its function remains unknown. Here we present a subnanometre-resolution cryo-electron microscopy reconstruction of the human Ndc80 complex bound to microtubules, sufficient for precise docking of crystal structures of the component proteins. We find that the Ndc80 complex binds the microtubule with a tubulin monomer repeat, recognizing α- and β-tubulin at both intra- and inter-tubulin dimer interfaces in a manner that is sensitive to tubulin conformation. Furthermore, Ndc80 complexes self-associate along protofilaments through interactions mediated by the amino-terminal tail of the NDC80 protein, which is the site of phospho-regulation by Aurora B kinase. The complex's mode of interaction with the microtubule and its oligomerization suggest a mechanism by which Aurora B could regulate the stability of load-bearing kinetochore-microtubule attachments.

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Primary Citation of related structures