3IXQ image
Deposition Date 2009-09-04
Release Date 2009-10-06
Last Version Date 2023-11-01
Entry Detail
PDB ID:
3IXQ
Keywords:
Title:
Structure of ribose 5-phosphate isomerase a from methanocaldococcus jannaschii
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.78 Å
R-Value Free:
0.18
R-Value Work:
0.14
R-Value Observed:
0.15
Space Group:
P 1 21 1
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Ribose-5-phosphate isomerase A
Gene (Uniprot):rpiA
Chain IDs:A, B, C, D
Chain Length:226
Number of Molecules:4
Biological Source:Methanocaldococcus jannaschii
Primary Citation
The structure of an archaeal ribose-5-phosphate isomerase from Methanocaldococcus jannaschii (MJ1603).
Acta Crystallogr.,Sect.F 65 1214 1217 (2009)
PMID: 20054114 DOI: 10.1107/S1744309109044923

Abstact

Ribose-5-phosphate isomerase is a ubiquitous intracellular enzyme of bacterial, plant and animal origin that is involved in the pentose phosphate cycle, an essential component of cellular carbohydrate metabolism. Specifically, the enzyme catalyses the reversible conversion of ribose 5-phosphate to ribulose 5-phosphate. The structure of ribose-5-phosphate isomerase from Methanocaldococcus jannaschii has been solved in space group P2(1) to 1.78 A resolution using molecular replacement with one homotetramer in the asymmetric unit and refined to an R factor of 14.8%. The active site in each subunit was occupied by two molecules of propylene glycol in different orientations, one of which corresponds to the location of the phosphate moiety and the other to the location of the furanose ring of the inhibitor.

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