ISDA

Deposition Date 2009-09-01

Release Date 2010-01-05

Last Version Date 2024-11-20

Entry Detail

PDB ID:

3IVI

Keywords:

HYDROLASE

Title:

Design and Synthesis of Potent BACE-1 Inhibitors with Cellular Activity: Structure-Activity Relationship of P1 Substituents

Biological Source:

Source Organism:

Homo sapiens (Taxon ID: 9606)

Host Organism:

Escherichia coli

Method Details:

Experimental Method:

X-RAY DIFFRACTION

Resolution:

2.20 Å

R-Value Free:

0.22

R-Value Work:

0.19

R-Value Observed:

0.19

Space Group:

P 1 21 1

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Macromolecular Entities

Protein Blast

Polymer Type:polypeptide(L)
Molecule:Beta-secretase 1
Gene (Uniprot):BACE1
Chain IDs:A, B, C
Chain Length:406
Number of Molecules:3
Biological Source:Homo sapiens

UniProt ID:P56817 Pfam ID:PF00026 EC:3.4.23.46

Ligand Molecules

2LI

GOL

SO4

Primary Citation

Design and synthesis of cell potent BACE-1 inhibitors: structure-activity relationship of P1' substituents.

Sealy, J.M, Truong, A.P, Tso, L, Probst, G.D, Aquino, J, Hom, R.K, Jagodzinska, B.M, Dressen, D, Wone, D.W, Brogley, L, John, V, Tung, J.S, Pleiss, M.A, Tucker, J.A, Konradi, A.W, Dappen, M.S, Toth, G, Pan, H, Ruslim, L, Miller, J, Bova, M.P, Sinha, S, Quinn, K.P, Sauer, J.M.Show

Bioorg.Med.Chem.Lett. 19 6386 6391 (2009)

PMID: 19811916 DOI: 10.1016/j.bmcl.2009.09.061

Abstact

Using structure-guided design, hydroxyethylamine BACE-1 inhibitors were optimized to nanomolar Abeta cellular inhibition with selectivity against cathepsin-D. X-ray crystallography illuminated the S1' residues critical to this effort, which culminated in compounds 56 and 57 that exhibited potency and selectivity but poor permeability and high P-gp efflux.

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Protein

Chemical

Disease

Primary Citation of related structures