3ITN image
Deposition Date 2009-08-28
Release Date 2010-03-02
Last Version Date 2024-11-20
Entry Detail
PDB ID:
3ITN
Title:
Crystal structure of Pseudo-activated Procaspase-3
Biological Source:
Source Organism:
Homo sapiens (Taxon ID: 9606)
(Taxon ID: )
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.63 Å
R-Value Free:
0.22
R-Value Work:
0.19
R-Value Observed:
0.19
Space Group:
I 2 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:Caspase-3
Gene (Uniprot):CASP3
Chain IDs:A
Chain Length:250
Number of Molecules:1
Biological Source:Homo sapiens
Polymer Type:polypeptide(L)
Molecule:ACETYL-ASP-GLU-VAL-ASP-CHLOROMETHYL KETONE inhibitor
Chain IDs:B
Chain Length:6
Number of Molecules:1
Biological Source:
Peptide-like Molecules
PRD_000238
Primary Citation
A constitutively active and uninhibitable caspase-3 zymogen efficiently induces apoptosis.
Biochem.J. 424 335 345 (2009)
PMID: 19788411 DOI: 10.1042/BJ20090825

Abstact

The caspase-3 zymogen has essentially zero activity until it is cleaved by initiator caspases during apoptosis. However, a mutation of V266E in the dimer interface activates the protease in the absence of chain cleavage. We show that low concentrations of the pseudo-activated procaspase-3 kill mammalian cells rapidly and, importantly, this protein is not cleaved nor is it inhibited efficiently by the endogenous regulator XIAP (X-linked inhibitor of apoptosis). The 1.63 A (1 A = 0.1 nm) structure of the variant demonstrates that the mutation is accommodated at the dimer interface to generate an enzyme with substantially the same activity and specificity as wild-type caspase-3. Structural modelling predicts that the interface mutation prevents the intersubunit linker from binding in the dimer interface, allowing the active sites to form in the procaspase in the absence of cleavage. The direct activation of procaspase-3 through a conformational switch rather than by chain cleavage may lead to novel therapeutic strategies for inducing cell death.

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Primary Citation of related structures