3HP4 image
Deposition Date 2009-06-03
Release Date 2009-06-30
Last Version Date 2023-09-06
Entry Detail
PDB ID:
3HP4
Keywords:
Title:
Crystal structure of psychrotrophic esterase EstA from Pseudoalteromonas sp. 643A inhibited by monoethylphosphonate
Biological Source:
Source Organism:
Host Organism:
Method Details:
Experimental Method:
Resolution:
1.35 Å
R-Value Free:
0.18
R-Value Work:
0.17
R-Value Observed:
0.17
Space Group:
P 61 2 2
Macromolecular Entities
Polymer Type:polypeptide(L)
Molecule:GDSL-esterase
Gene (Uniprot):estA
Chain IDs:A
Chain Length:185
Number of Molecules:1
Biological Source:Pseudoalteromonas sp.
Modified Residue
Compound ID Chain ID Parent Comp ID Details 2D Image
MIR A SER MONOETHYLPHOSPHORYLSERINE
Primary Citation
Structure of EstA esterase from psychrotrophic Pseudoalteromonas sp. 643A covalently inhibited by monoethylphosphonate.
Acta Crystallogr.,Sect.F 65 862 865 (2009)
PMID: 19724118 DOI: 10.1107/S1744309109030826

Abstact

The crystal structure of the esterase EstA from the cold-adapted bacterium Pseudoalteromonas sp. 643A was determined in a covalently inhibited form at a resolution of 1.35 A. The enzyme has a typical SGNH hydrolase structure consisting of a single domain containing a five-stranded beta-sheet, with three helices at the convex side and two helices at the concave side of the sheet, and is ornamented with a couple of very short helices at the domain edges. The active site is located in a groove and contains the classic catalytic triad of Ser, His and Asp. In the structure of the crystal soaked in diethyl p-nitrophenyl phosphate (DNP), the catalytic serine is covalently connected to a phosphonate moiety that clearly has only one ethyl group. This is the only example in the Protein Data Bank of a DNP-inhibited enzyme with covalently bound monoethylphosphate.

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Primary Citation of related structures